STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0000757Prohibitin. (305 aa)    
Predicted Functional Partners:
BK809_0004484
Prohibitin.
  
0.998
BK809_0006711
Putative mitochondrial processing peptidase beta; Belongs to the peptidase M16 family.
  
 0.934
BK809_0004542
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.881
BK809_0007123
Mitochondrial respiratory chain complexes assembly protein YTA12.
   
 0.881
BK809_0003635
Mitochondrial inner membrane i-AAA protease supercomplex subunit YME1.
   
 0.830
BK809_0005142
Mitochondrial-processing peptidase subunit alpha.
  
 0.795
BK809_0003180
Rhomboid protein 1, mitochondrial.
   
 0.778
BK809_0003189
PHB domain-containing protein.
   
 
 0.752
BK809_0003931
Putative mitochondrial chaperone BCS1-B; Belongs to the AAA ATPase family.
   
 0.740
BK809_0005535
Heat shock 70 kDa protein; Belongs to the heat shock protein 70 family.
   
 0.736
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.