STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0007484Putative mitotic check point protein. (332 aa)    
Predicted Functional Partners:
BK809_0004594
Putative septum-promoting gtp-binding protein 1.
  
 0.998
BK809_0004830
Cytokinesis protein sepH.
  
 
 
 0.980
BK809_0000954
UPF0614 protein.
    
 0.978
BK809_0008011
Tyrosine-protein phosphatase CDC14.
    
 
 0.964
BK809_0004392
Protein byr4.
    
 0.955
BK809_0007396
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.927
BK809_0003167
Septation initiation network scaffold protein cdc11.
    
 
 0.909
BK809_0002587
Uncharacterized protein.
   
 
 0.782
BK809_0000789
Guanine nucleotide exchange factor LTE1.
    
 
 0.779
BK809_0006129
GTP-binding protein ypt2.
    
 0.737
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.