STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0004542Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (443 aa)    
Predicted Functional Partners:
BK809_0001458
37S ribosomal protein SWS2, mitochondrial; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.999
BK809_0007162
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
BK809_0007500
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.999
BK809_0006038
Putative 60s ribosomal protein l25.
  
 
 0.998
BK809_0007973
Putative 60s ribosomal protein l5.
  
 
 0.998
BK809_0004567
37S ribosomal protein MRP17, mitochondrial.
  
 0.998
BK809_0004737
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
 0.998
BK809_0001371
Ribosomal protein S16, mitochondrial.
  
 0.998
BK809_0003945
54S ribosomal protein subunit img1, mitochondrial.
   
 0.998
BK809_0002918
60S ribosomal protein L35.
  
 
 0.998
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.