STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0003578Putative 2-oxoglutarate dehydrogenase e1 component. (1048 aa)    
Predicted Functional Partners:
BK809_0002196
Dihydrolipoyllysine-residue succinyltransferase.
 0.999
BK809_0000750
Dihydrolipoyl dehydrogenase.
  
 0.992
BK809_0002057
Succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial.
 
 0.991
BK809_0006585
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 0.984
BK809_0006631
Pyruvate dehydrogenase complex protein X component, mitochondrial.
  
 0.979
BK809_0003026
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
 
 0.979
BK809_0002841
Putative atp citrate lyase subunit putatibe.
  
 0.975
BK809_0002842
Putative ATP-citrate synthase subunit 1.
  
 0.975
BK809_0000711
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
 
 
 0.957
BK809_0001181
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 
 0.944
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.