STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0002408Vacuolar protease A; Belongs to the peptidase A1 family. (419 aa)    
Predicted Functional Partners:
BK809_0007717
Uncharacterized protein.
   
 0.649
BK809_0000937
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.608
BK809_0004125
Required for respiratory growth protein 9, mitochondrial.
   
 0.608
BK809_0000844
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
 
      0.603
BK809_0007260
Reticulon-like protein.
   
  0.582
BK809_0002259
Polynucleotide 5'-hydroxyl-kinase grc3.
 
      0.495
BK809_0004324
Putative zinc protease.
     
 0.477
BK809_0001380
Putative autophagic serine protease alp2; Belongs to the peptidase S8 family.
   
 
 0.476
BK809_0000861
Uncharacterized protein.
 
      0.476
BK809_0007171
Cuticle-degrading protease; Belongs to the peptidase S8 family.
   
 
 0.476
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.