STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0002445Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1275 aa)    
Predicted Functional Partners:
BK809_0000707
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
 0.999
BK809_0002179
Structural maintenance of chromosomes protein 4.
   
 0.999
BK809_0005742
Structural maintenance of chromosomes protein 2.
   
 0.999
BK809_0004328
Condensin complex subunit 3.
   
 0.996
BK809_0001392
Structural maintenance of chromosomes protein.
   
 0.913
BK809_0001725
Structural maintenance of chromosomes protein 5.
   
 0.899
BK809_0006655
Structural maintenance of chromosomes protein.
   
 0.898
BK809_0006632
Uncharacterized protein.
   
 0.888
BK809_0006266
DNA polymerase.
   
  
 0.880
BK809_0006903
BTB domain-containing protein.
   
 0.874
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.