STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0002742DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1232 aa)    
Predicted Functional Partners:
BK809_0002635
Putative dna mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.999
BK809_0001672
DNA mismatch repair protein Mlh1.
 
 0.991
BK809_0002357
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
0.985
BK809_0006408
Mismatch repair endonuclease PMS2.
 
 0.985
BK809_0007386
MutS protein-like protein 1.
  
0.979
BK809_0003173
MutS protein-like protein 5.
  
0.977
BK809_0007348
Vezatin domain-containing protein.
   
 0.976
BK809_0007699
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.976
BK809_0007490
PMS1 protein-like protein 1.
 
 0.975
BK809_0002085
Exodeoxyribonuclease 1.
   
 0.950
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.