STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0006254D-lactate dehydrogenase [cytochrome], mitochondrial. (549 aa)    
Predicted Functional Partners:
BK809_0006201
Cytochrome b2, mitochondrial.
 
 0.938
BK809_0004732
Putative mitochondrial cytochrome b2.
 
 0.926
BK809_0004859
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 0.908
BK809_0002693
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.902
BK809_0002472
Malic enzyme.
  
 
 0.897
BK809_0003645
Malic enzyme.
  
 
 0.897
BK809_0002372
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 
  0.895
BK809_0006762
D-lactate dehydrogenase [cytochrome] 1, mitochondrial.
  
  
 
0.894
BK809_0006165
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.893
BK809_0005109
Putative hydroxyacylglutathione hydrolase.
    
 0.892
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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