STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0002705Protoheme IX farnesyltransferase, mitochondrial. (296 aa)    
Predicted Functional Partners:
BK809_0004103
Cytochrome c oxidase assembly protein COX11, mitochondrial.
  
 0.993
BK809_0003835
Electron transfer protein 1, mitochondrial.
  
 0.992
BK809_0004272
Cytochrome c oxidase subunit 6, mitochondrial.
   
 
 0.949
BK809_0001029
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.944
BK809_0004791
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
   
 
 0.944
BK809_0006952
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
   
 
 0.943
BK809_0001786
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
    
 0.931
BK809_0000123
Cytochrome c oxidase polypeptide 5, mitochondrial.
   
 
 0.923
BK809_0003691
Cytochrome c oxidase subunit 4, mitochondrial.
   
 
 0.916
BK809_0005468
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 
 0.910
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.