STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_000627340S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (147 aa)    
Predicted Functional Partners:
BK809_0002006
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.999
BK809_0001907
Putative 60s ribosomal protein l24.
  
 0.999
BK809_0001496
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.999
BK809_0005725
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
BK809_0005064
Putative 60s ribosomal protein l31.
   
 0.999
BK809_0006038
Putative 60s ribosomal protein l25.
  
 0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
BK809_0003877
Putative 60s ribosomal protein l27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.999
BK809_0007225
Putative 60s ribosomal protein l16.
  
 0.999
BK809_0001617
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.999
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.