STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0006435Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
BK809_0007793
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.848
BK809_0007280
Putative cdc73 family rna pol ii accessory factor.
    
 0.790
BK809_0003952
Anaphase-promoting complex subunit cut9.
    
 0.789
BK809_0001091
Anaphase-promoting complex subunit 10.
    
 0.785
BK809_0001084
Anaphase-promoting complex subunit 4.
    
 0.783
BK809_0003203
RNA polymerase-associated protein LEO1.
    
 0.783
BK809_0002270
Negative regulator of mitosis.
    
 0.782
BK809_0005467
Anaphase-promoting complex subunit 5.
    
 0.773
BK809_0002287
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.750
BK809_0006603
FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]
    
 0.695
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.