STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0006429Uncharacterized protein. (594 aa)    
Predicted Functional Partners:
BK809_0004812
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.656
BK809_0006663
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.636
BK809_0000711
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.511
BK809_0006977
Acetolactate synthase.
  
 
 0.507
BK809_0002811
Benzoylformate decarboxylase.
  
 
 0.507
BK809_0005247
Benzaldehyde lyase; Belongs to the TPP enzyme family.
  
 
 0.507
BK809_0000239
Putative trans-2-enoyl-CoA reductase, mitochondrial.
     
 0.498
BK809_0002075
Peroxisome assembly protein 12.
    
 0.492
BK809_0007730
Peroxisomal membrane protein PAS20.
    
  0.491
BK809_0000829
Glutaryl-CoA dehydrogenase, mitochondrial.
  
 
 0.486
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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