STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0006560Protein YIP. (295 aa)    
Predicted Functional Partners:
BK809_0005754
Protein YIP.
   
 
 0.948
BK809_0006960
Protein transport protein yip1.
   
 
 0.875
BK809_0006562
GTPase-activating protein gyp10.
 
      0.873
BK809_0007466
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.
   
 
 0.789
BK809_0001862
Protein transport protein yif1.
   
  
 0.511
BK809_0002440
Trehalose-6-phosphate synthase.
   
 
 0.441
BK809_0002325
Putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 106 kDa subunit.
   
 
 0.441
BK809_0002504
Trehalose-phosphatase.
   
 
 0.441
BK809_0005221
Trehalose synthase complex regulatory subunit TPS3.
   
 
 0.441
BK809_0002394
Prenylated Rab acceptor 1.
   
  
 0.424
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.