STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_000648337S ribosomal protein NAM9, mitochondrial. (353 aa)    
Predicted Functional Partners:
BK809_0006409
Putative elongation factor 3.
  
 
 0.994
BK809_0007155
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.994
BK809_0002171
Putative 40s ribosomal protein s20.
  
 0.994
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.994
BK809_0006147
Putative 40s ribosomal protein s14; Belongs to the universal ribosomal protein uS11 family.
  
 0.994
BK809_0002673
Putative ribosomal protein s5; Belongs to the universal ribosomal protein uS5 family.
  
 0.994
BK809_0001458
37S ribosomal protein SWS2, mitochondrial; Belongs to the universal ribosomal protein uS13 family.
  
 0.994
BK809_0007162
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.994
BK809_0007500
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.994
BK809_0001793
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.993
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.