BK809_0006925 protein (Diplodia seriata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BK809_0006925

UDP-N-acetylglucosamine pyrophosphorylase. (509 aa)

Predicted Functional Partners:

BK809_0006316

0.964

BK809_0002251

0.939

BK809_0005753

0.934

BK809_0006398

0.909

BK809_0001185

0.909

BK809_0007765

0.909

BK809_0005686

0.909

BK809_0006572

0.906

BK809_0006573

0.906

BK809_0006261

0.873

Your Current Organism:

Diplodia seriata

NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BK809_0001185	BK809_0006316	A0A1S8B6E3	A0A1S8B364	Chitin synthase; Plays a major role in cell wall biogenesis.	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.	0.409
BK809_0001185	BK809_0006398	A0A1S8B6E3	A0A1S8B409	Chitin synthase; Plays a major role in cell wall biogenesis.	Chitin synthase D.	0.586
BK809_0001185	BK809_0006572	A0A1S8B6E3	A0A0G2E2B5	Chitin synthase; Plays a major role in cell wall biogenesis.	Putative class v chitin synthase.	0.501
BK809_0001185	BK809_0006573	A0A1S8B6E3	A0A1S8B4C0	Chitin synthase; Plays a major role in cell wall biogenesis.	Chitin synthase 8; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.490
BK809_0001185	BK809_0006925	A0A1S8B6E3	A0A1S8B510	Chitin synthase; Plays a major role in cell wall biogenesis.	UDP-N-acetylglucosamine pyrophosphorylase.	0.909
BK809_0002251	BK809_0005753	A0A1S8BEY8	A0A1S8BNA2	Bifunctional protein GAL10.	Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.	0.998
BK809_0002251	BK809_0006261	A0A1S8BEY8	A0A1S8B312	Bifunctional protein GAL10.	Galactokinase.	0.999
BK809_0002251	BK809_0006316	A0A1S8BEY8	A0A1S8B364	Bifunctional protein GAL10.	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.	0.890
BK809_0002251	BK809_0006925	A0A1S8BEY8	A0A1S8B510	Bifunctional protein GAL10.	UDP-N-acetylglucosamine pyrophosphorylase.	0.939
BK809_0005686	BK809_0006316	A0A1S8BNF7	A0A1S8B364	Chitin synthase; Plays a major role in cell wall biogenesis.	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.	0.409
BK809_0005686	BK809_0006398	A0A1S8BNF7	A0A1S8B409	Chitin synthase; Plays a major role in cell wall biogenesis.	Chitin synthase D.	0.586
BK809_0005686	BK809_0006572	A0A1S8BNF7	A0A0G2E2B5	Chitin synthase; Plays a major role in cell wall biogenesis.	Putative class v chitin synthase.	0.523
BK809_0005686	BK809_0006573	A0A1S8BNF7	A0A1S8B4C0	Chitin synthase; Plays a major role in cell wall biogenesis.	Chitin synthase 8; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.524
BK809_0005686	BK809_0006925	A0A1S8BNF7	A0A1S8B510	Chitin synthase; Plays a major role in cell wall biogenesis.	UDP-N-acetylglucosamine pyrophosphorylase.	0.909
BK809_0005753	BK809_0002251	A0A1S8BNA2	A0A1S8BEY8	Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.	Bifunctional protein GAL10.	0.998
BK809_0005753	BK809_0006261	A0A1S8BNA2	A0A1S8B312	Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.	Galactokinase.	0.998
BK809_0005753	BK809_0006316	A0A1S8BNA2	A0A1S8B364	Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.	0.891
BK809_0005753	BK809_0006925	A0A1S8BNA2	A0A1S8B510	Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.	UDP-N-acetylglucosamine pyrophosphorylase.	0.934
BK809_0006261	BK809_0002251	A0A1S8B312	A0A1S8BEY8	Galactokinase.	Bifunctional protein GAL10.	0.999
BK809_0006261	BK809_0005753	A0A1S8B312	A0A1S8BNA2	Galactokinase.	Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.	0.998