STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0004636Carboxypeptidase; Belongs to the peptidase S10 family. (626 aa)    
Predicted Functional Partners:
BK809_0004635
DNA repair and recombination protein mus-11.
 
      0.874
BK809_0004638
Uncharacterized protein.
 
      0.736
BK809_0007480
Putative pheromone processing endoprotease kex2; Belongs to the peptidase S8 family.
   
 
 0.538
BK809_0000973
Putative beta-galactosidase C.
   
 0.491
BK809_0000853
Putative beta-galactosidase B.
   
 0.491
BK809_0002945
Beta-galactosidase.
   
 0.491
BK809_0002451
Pro-apoptotic serine protease.
      
 0.489
BK809_0000124
Glyceraldehyde-3-phosphate dehydrogenase.
      
 0.461
BK809_0006600
Separin.
      
 0.457
BK809_0007717
Uncharacterized protein.
   
 0.449
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.