STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0004688Unsaturated rhamnogalacturonyl hydrolase YteR. (378 aa)    
Predicted Functional Partners:
BK809_0006968
Uncharacterized protein.
 
      0.761
BK809_0002251
Bifunctional protein GAL10.
  
 
  0.482
BK809_0001147
Putative choline sulfatase.
    
  0.439
BK809_0007312
Arylsulfatase.
    
  0.439
BK809_0004549
Putative sulfatase yidJ.
    
  0.439
BK809_0000076
Arylsulfatase.
    
  0.439
BK809_0001658
Arylsulfatase; Belongs to the sulfatase family.
    
  0.439
BK809_0000901
N-sulfoglucosamine sulfohydrolase.
    
  0.439
BK809_0003358
Putative sulfatase PB10D8.02c.
    
  0.439
BK809_0003770
Bud site selection protein 22.
    
  0.439
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.