STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0004853Putative metallocarboxypeptidase ECM14. (591 aa)    
Predicted Functional Partners:
BK809_0006405
Nitrate reductase [NADH] 1.
    
 0.760
BK809_0006514
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.760
BK809_0006463
Uncharacterized protein.
    
 0.565
BK809_0004803
Uncharacterized protein.
    
 0.565
BK809_0004393
Uncharacterized protein.
    
 0.565
BK809_0007835
Uncharacterized protein.
    
 0.565
BK809_0005543
Uncharacterized protein.
    
 0.565
BK809_0006013
Uncharacterized protein.
    
 0.565
BK809_0004243
Nucleoside diphosphate kinase.
   
  0.505
BK809_0001583
37S ribosomal protein S23, mitochondrial.
     
 0.456
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.