STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0004920SH3 domain-containing protein. (976 aa)    
Predicted Functional Partners:
BK809_0006314
GTP-binding protein rho2.
   
 0.994
BK809_0001053
Transforming protein RhoA.
   
 0.994
BK809_0004776
GTP-binding protein rhoA.
   
 0.994
BK809_0004704
Cell division control protein 42-like protein.
   
 0.994
BK809_0003512
GTP-binding protein rhoC.
   
 0.994
BK809_0005475
GTP-binding protein RHO3.
   
 0.994
BK809_0005484
Ras-related C3 botulinum toxin substrate 1.
   
 0.994
BK809_0004002
Ras-related protein Rab-14.
   
 0.986
BK809_0005278
Mitochondrial Rho GTPase 1.
   
 0.986
BK809_0004594
Putative septum-promoting gtp-binding protein 1.
   
 0.985
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.