STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0005103AB hydrolase superfamily protein. (283 aa)    
Predicted Functional Partners:
BK809_0006987
Cyclopentanone 1,2-monooxygenase.
 
 
  0.540
BK809_0007631
Cyclopentanone 1,2-monooxygenase.
 
 
  0.540
BK809_0003350
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
    
  0.533
BK809_0005707
Neutral cholesterol ester hydrolase 1.
  
     0.503
BK809_0000079
Cyclopentanone 1,2-monooxygenase.
 
 
  0.497
BK809_0005031
Ankyrin repeat protein nuc-2.
   
 0.481
BK809_0003060
Glycerophosphodiester phosphodiesterase GDE1.
   
 0.477
BK809_0001494
Cytochrome c1, heme protein, mitochondrial.
    
  0.474
BK809_0004499
Cyclopentanone 1,2-monooxygenase.
 
 
  0.471
BK809_0003563
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
  0.469
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.