STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0005219Hybrid signal transduction histidine kinase B. (879 aa)    
Predicted Functional Partners:
BK809_0006165
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.601
BK809_0003803
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
    
 0.601
BK809_0004092
Multistep phosphorelay regulator 1.
   
 0.584
BK809_0003056
MAP kinase kinase kinase.
    
 0.578
BK809_0002196
Dihydrolipoyllysine-residue succinyltransferase.
    
 0.559
BK809_0006585
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.559
BK809_0006631
Pyruvate dehydrogenase complex protein X component, mitochondrial.
    
 0.559
BK809_0003026
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.559
BK809_0004824
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
 0.557
BK809_0006382
Putative ribose-phosphate pyrophosphokinase 1.
    
 0.554
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.