STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0001264Dicarboxylic amino acid permease. (581 aa)    
Predicted Functional Partners:
BK809_0007959
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
   
 
 0.570
BK809_0002052
Alpha-glucosidase.
 
 
 0.453
BK809_0002301
Alpha-glucosidase.
 
 
 0.453
BK809_0007345
Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 3.
   
 0.453
BK809_0003845
Cell wall alpha-1,3-glucan synthase mok13.
   
  0.444
BK809_0001030
Alpha-amylase.
 
 
  0.444
BK809_0001042
Alpha-amylase A type-3.
   
  0.444
BK809_0001086
Glucan 1,4-alpha-maltohexaosidase.
 
 
  0.444
BK809_0003844
Alpha-amylase 2.
   
  0.444
BK809_0001003
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
  0.439
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.