STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0001364Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial. (599 aa)    
Predicted Functional Partners:
BK809_0001348
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
 
 0.998
BK809_0007012
Urea amidolyase.
  
 0.985
BK809_0001279
Isovaleryl-CoA dehydrogenase 2, mitochondrial.
 
 0.985
BK809_0003756
Pyruvate carboxylase.
 
 0.968
BK809_0002372
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
 
 0.939
BK809_0006284
Putative enoyl-CoA hydratase, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.937
BK809_0002153
Methylglutaconyl-CoA hydratase, mitochondrial.
  
 
 0.936
BK809_0004812
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.892
BK809_0005797
Acyl-CoA dehydrogenase family member 11.
  
 
  0.891
BK809_0000244
Biotin--protein ligase.
  
 
 0.879
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.