STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0000085Uncharacterized protein. (475 aa)    
Predicted Functional Partners:
BK809_0005387
Casein kinase I-like protein hhp1; Belongs to the protein kinase superfamily.
    
 0.660
BK809_0007396
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.646
BK809_0004942
Putative metallophosphoesterase.
    
  0.592
BK809_0003557
Serine/threonine-protein phosphatase.
    
  0.592
BK809_0006600
Separin.
    
 0.589
BK809_0007011
ADP-ribosylation factor-like protein 1.
    
  0.589
BK809_0003074
TNF receptor-associated factor 6.
    
 0.582
BK809_0003586
Spindle pole body component alp14.
    
 
 0.577
BK809_0000600
NAD-dependent protein deacetylase hst2-1.
    
  0.558
BK809_0002261
Anucleate primary sterigmata protein B.
  
  
  0.557
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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