STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0000191Gluconolactonase. (331 aa)    
Predicted Functional Partners:
BK809_0006927
Gluconolactonase.
  
  
 
0.898
BK809_0004886
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
  
 0.707
BK809_0006574
Eukaryotic translation initiation factor 5B.
  
  
 0.665
BK809_0002098
Translation initiation factor IF-2, mitochondrial.
  
  
 0.665
BK809_0003396
CCA tRNA nucleotidyltransferase, mitochondrial; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
 0.662
BK809_0003222
54S ribosomal protein RML2, mitochondrial.
   
   0.636
BK809_0005816
60S ribosomal protein L2.
   
   0.624
BK809_0006038
Putative 60s ribosomal protein l25.
   
    0.620
BK809_0004676
54S ribosomal protein L9, mitochondrial.
   
  
 0.618
BK809_0007395
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
  
 0.618
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
Server load: low (16%) [HD]