STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0001546Serine/threonine-protein kinase/endoribonuclease IRE1. (1180 aa)    
Predicted Functional Partners:
BK809_0003817
78 kDa glucose-regulated protein-like protein; Belongs to the heat shock protein 70 family.
    
 0.983
BK809_0004920
SH3 domain-containing protein.
   
 0.958
BK809_0003074
TNF receptor-associated factor 6.
   
 0.837
BK809_0000554
E3 ubiquitin-protein ligase HERC2.
    
 0.822
BK809_0002161
E3 ubiquitin-protein ligase synoviolin.
    
 
 0.811
BK809_0003063
Translation initiation factor RLI1.
   
 0.755
BK809_0005671
Next to BRCA1 gene 1 protein.
    
 0.749
BK809_0002460
Transcription factor prr1.
    
 0.732
BK809_0006152
Transcriptional activator hacA.
   
 0.711
BK809_0006427
Putative Rho-type GTPase-activating protein 4.
   
 0.705
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.