STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_00017052,2-dialkylglycine decarboxylase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (456 aa)    
Predicted Functional Partners:
BK809_0004825
Alanine--glyoxylate aminotransferase 1.
  
 0.924
BK809_0001637
Glutamate decarboxylase 1.
 
 0.844
BK809_0006142
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.837
BK809_0004418
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
0.824
BK809_0001720
Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family.
     
 0.816
BK809_0004808
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.803
BK809_0001999
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.799
BK809_0005306
Putative alanine aminotransferase, mitochondrial.
   
 0.795
BK809_0001348
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
    
 0.792
BK809_0007601
Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial.
 
 
 
 0.784
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.