STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0000656Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
BK809_0005409
WD repeat-containing protein mip1.
    
 0.656
BK809_0001462
Serine/threonine-protein kinase atg1.
    
 0.640
BK809_0007898
Putative nuclear protein snf4.
   
 0.637
BK809_0002235
Protein SDS23; Involved in DNA replication and cell separation. Belongs to the SDS23 family.
   
 0.637
BK809_0001998
AMPK1_CBM domain-containing protein.
    
 0.634
BK809_0005857
SNF1 protein kinase subunit beta-2.
    
 0.634
BK809_0002784
Meiotically up-regulated gene 70 protein.
   
 0.625
BK809_0003995
Tuberous sclerosis 2 protein-like protein.
    
 0.604
BK809_0006220
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.598
BK809_0002796
Exosome complex exonuclease rrp6.
    
 0.598
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.