STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0004102CFEM domain-containing protein. (259 aa)    
Predicted Functional Partners:
BK809_0005982
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
    
  0.731
BK809_0006192
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.615
BK809_0005944
Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  0.606
BK809_0006276
Putative phosphatidyl synthase.
   
  0.600
BK809_0007909
Putative CDP-alcohol phosphatidyltransferase class-I family protein.
   
  0.600
BK809_0005373
Putative CDP-alcohol phosphatidyltransferase class-I family protein.
   
  0.600
BK809_0004367
UBA domain-containing protein 7.
    
 0.599
BK809_0005031
Ankyrin repeat protein nuc-2.
    
 0.592
BK809_0006427
Putative Rho-type GTPase-activating protein 4.
    
 0.591
BK809_0003568
Putative kinetochore protein nuf2.
    
  0.587
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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