STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0004128Target of rapamycin complex 2 subunit bit61. (882 aa)    
Predicted Functional Partners:
BK809_0004087
Vacuolar morphogenesis protein 6.
 
  
   0.898
BK809_0006220
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.884
BK809_0000136
Protein ste16.
    
 0.792
BK809_0004627
Target of rapamycin complex subunit LST8.
    
 0.769
BK809_0004685
Stress-activated map kinase-interacting protein 1.
    
 0.769
BK809_0004112
Putative fructose-bisphosphatase.
 
    
 0.766
BK809_0002506
Target of rapamycin complex 2 subunit AVO2.
    
 
 0.631
BK809_0001366
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.610
BK809_0004131
Ribosome biogenesis protein tsr1-like protein.
   
  0.602
BK809_0008028
Uncharacterized protein.
   
  0.602
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.