STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0002206TauD domain-containing protein. (403 aa)    
Predicted Functional Partners:
BK809_0006405
Nitrate reductase [NADH] 1.
   
 
 0.765
BK809_0006514
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.765
BK809_0007672
Gamma-butyrobetaine dioxygenase.
     
 0.687
BK809_0006421
Putative thiosulfate sulfurtransferase, mitochondrial.
     
 0.634
BK809_0004498
Uncharacterized protein.
  
 
  0.589
BK809_0002322
Putative branched-chain-amino-acid aminotransferase TOXF.
   
 
  0.583
BK809_0004808
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 
  0.583
BK809_0006111
Putative fatty acid oxidation complex subunit alpha.
    
 0.574
BK809_0002524
L-carnitine dehydrogenase.
    
 0.574
BK809_0003527
Sulfite reductase [NADPH] subunit beta.
     
 0.572
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.