STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0002178Actin-related protein 4; Belongs to the actin family. (445 aa)    
Predicted Functional Partners:
BK809_0007014
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
0.994
BK809_0005206
Actin, gamma.
  
 
0.992
BK809_0005724
SWI/SNF and RSC complexes subunit ssr3.
   
 0.989
BK809_0005045
SWR1-complex protein 4.
   
 0.987
BK809_0006547
SWI/SNF and RSC complexes subunit ssr2.
    
 0.986
BK809_0004081
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.985
BK809_0002406
SWI/SNF chromatin-remodeling complex subunit snf5.
   
 0.985
BK809_0006769
Helicase swr1.
    
 0.984
BK809_0003008
Chromatin structure-remodeling complex subunit sfh1.
   
 0.982
BK809_0000114
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.979
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.