STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0002085Exodeoxyribonuclease 1. (721 aa)    
Predicted Functional Partners:
BK809_0004252
Werner syndrome ATP-dependent helicase.
  
 0.997
BK809_0002939
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
  
 0.984
BK809_0002954
Double-strand break repair protein mus-23; Belongs to the MRE11/RAD32 family.
   
 0.982
BK809_0002635
Putative dna mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).
   
 0.980
BK809_0001672
DNA mismatch repair protein Mlh1.
   
 0.978
BK809_0004745
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.977
BK809_0002210
ATP-dependent DNA helicase hus2/rqh1.
  
 0.977
BK809_0006408
Mismatch repair endonuclease PMS2.
   
 0.957
BK809_0003139
DNA replication ATP-dependent helicase DNA2.
   
 0.955
BK809_0002742
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 0.950
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.