STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0003402Vacuolar membrane-associated protein iml-1. (2024 aa)    
Predicted Functional Partners:
BK809_0001909
Putative RWD, RING finger and WD repeat-containing protein.
  
 0.997
BK809_0003137
Nitrogen permease regulator 3.
    
 0.997
BK809_0006876
Nitrogen permease regulator 2.
    
 0.996
BK809_0007042
WD repeat-containing protein.
   
 0.996
BK809_0004365
Ras-related GTP-binding protein A.
    
 0.981
BK809_0007276
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.981
BK809_0003081
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.981
BK809_0001208
GTP-binding protein gtr2.
   
 0.973
BK809_0008084
Mitochondrial inner membrane protease subunit 1.
    
 0.955
BK809_0003816
Uncharacterized protein.
    
 0.852
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.