STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0003622Vacuolar protein sorting-associated protein 13. (2855 aa)    
Predicted Functional Partners:
BK809_0000235
DUF1691 domain-containing protein.
    
 
 0.641
BK809_0006109
Vacuolar protein sorting-associated protein 35.
   
 
 0.640
BK809_0002390
Inositol-1,4,5-trisphosphate 5-phosphatase 1.
    
 
 0.575
BK809_0004367
UBA domain-containing protein 7.
    
 
 0.568
BK809_0004087
Vacuolar morphogenesis protein 6.
   
 
 0.514
BK809_0006757
Autophagy-related protein 2.
   
  
 0.507
BK809_0005000
Vesicle-associated membrane protein-associated protein.
    
 
 0.498
BK809_0001318
Acetyl-CoA carboxylase.
   
  
 0.487
MDM10
Mitochondrial distribution and morphology protein 10; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis and may function in phospholipid exchange. MDM10 is involved in the late assembly steps of the general translocase of the mitochondrial outer membrane (TOM complex). Functions in the TOM40-specific route of the assembly of outer membrane beta-barrel proteins, including the association of TOM40 with the recepto [...]
    
 
 0.484
BK809_0004343
CCHC-type domain-containing protein.
    
 
 0.482
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.