STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0003588Laccase-3; Belongs to the multicopper oxidase family. (609 aa)    
Predicted Functional Partners:
BK809_0006405
Nitrate reductase [NADH] 1.
   
 0.622
BK809_0006514
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.622
BK809_0000096
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.605
BK809_0002258
Nucleoporin-like protein 2.
    
 0.590
BK809_0001121
Plasma membrane iron permease.
   
 
 0.548
BK809_0000336
Plasma membrane iron permease.
   
 
 0.548
BK809_0006758
Putative copper-transporting atpase.
  
 
 0.458
BK809_0001029
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.458
BK809_0000222
P-type cation-transporting ATPase.
  
 
 0.458
BK809_0000218
P-type cation-transporting ATPase.
  
 
 0.458
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.