STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0003816Uncharacterized protein. (184 aa)    
Predicted Functional Partners:
BK809_0004365
Ras-related GTP-binding protein A.
    
 0.978
BK809_0001208
GTP-binding protein gtr2.
    
 0.974
BK809_0005409
WD repeat-containing protein mip1.
    
 0.956
BK809_0006876
Nitrogen permease regulator 2.
   
 0.927
BK809_0003137
Nitrogen permease regulator 3.
    
 0.883
BK809_0001640
Folliculin.
    
 0.871
BK809_0003402
Vacuolar membrane-associated protein iml-1.
    
 0.852
BK809_0006220
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.840
BK809_0002796
Exosome complex exonuclease rrp6.
    
 0.840
BK809_0004627
Target of rapamycin complex subunit LST8.
    
 0.838
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.