STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0000121Cell polarity protein alp11. (247 aa)    
Predicted Functional Partners:
BK809_0003148
Tubulin-specific chaperone E.
    
0.711
BK809_0007736
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
    0.609
BK809_0001614
Tubulin-specific chaperone D.
    
 0.586
BK809_0002858
Uncharacterized protein.
    
 0.586
BK809_0002562
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
 
 0.574
BK809_0000959
ADP-ribosylation factor-like protein 2.
   
  
 0.535
BK809_0001679
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.503
BK809_0007367
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
   
 0.503
BK809_0002552
Putative gtpase-activating protein.
     
 0.420
BK809_0005223
RasGAP_C domain-containing protein.
     
 0.420
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.