STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0000450SEC7 domain-containing protein. (1612 aa)    
Predicted Functional Partners:
BK809_0006584
Protein transport protein SEC7.
   
 
0.939
BK809_0003196
Putative adp-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.922
BK809_0003039
Uncharacterized protein.
    
 0.922
BK809_0005451
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.915
BK809_0002261
Anucleate primary sterigmata protein B.
    
 0.900
BK809_0007810
Intracellular protein transport protein USO1.
   
 0.855
BK809_0000760
Putative coatomer subunit alpha.
   
 0.825
BK809_0006616
ADP-ribosylation factor GTPase-activating protein GCS1.
    
 0.814
BK809_0002101
PH and SEC7 domain-containing protein C11E3.11c.
  
 
0.807
BK809_0007011
ADP-ribosylation factor-like protein 1.
    
 0.791
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.