STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0000587Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (191 aa)    
Predicted Functional Partners:
BK809_0001437
Superoxide dismutase [Cu-Zn].
   
 0.951
BK809_0003111
Putative cu zn superoxide dismutase.
   
 0.832
BK809_0004737
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
  0.817
BK809_0007857
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.782
BK809_0006421
Putative thiosulfate sulfurtransferase, mitochondrial.
  
 
 0.769
BK809_0000817
37S ribosomal protein rsm18, mitochondrial.
   
 
 0.757
BK809_0008025
Putative 50s ribosomal subunit protein l15.
  
 
 0.756
BK809_0004676
54S ribosomal protein L9, mitochondrial.
  
 
 0.750
BK809_0000138
54S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.747
BK809_0005570
54S ribosomal protein L4, mitochondrial.
   
   0.747
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.