STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0007178TBC1 domain family member 5. (771 aa)    
Predicted Functional Partners:
BK809_0006109
Vacuolar protein sorting-associated protein 35.
   
 
 0.836
BK809_0003028
Putative vacuolar protein sorting-associated protein 26.
   
 
 0.802
BK809_0003399
GTP-binding protein ryh1.
   
 
 0.643
BK809_0002632
GTPase-activating protein gyp1.
    
 
0.531
BK809_0006562
GTPase-activating protein gyp10.
    
 
 0.523
BK809_0005899
Peroxisomal biogenesis factor 3.
      
 0.493
BK809_0006727
Trafficking protein particle complex subunit 3.
  
 
 
 0.477
BK809_0001674
GTPase-activating protein GYP7.
      
0.465
BK809_0002415
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.447
BK809_0004663
N-terminal acetyltransferase A complex catalytic subunit ard1.
      
 0.445
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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