STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0007101Quercetin 2,3-dioxygenase. (383 aa)    
Predicted Functional Partners:
BK809_0005944
Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  0.606
BK809_0004367
UBA domain-containing protein 7.
   
 0.602
BK809_0006276
Putative phosphatidyl synthase.
    
  0.598
BK809_0007909
Putative CDP-alcohol phosphatidyltransferase class-I family protein.
    
  0.598
BK809_0005373
Putative CDP-alcohol phosphatidyltransferase class-I family protein.
    
  0.598
BK809_0005031
Ankyrin repeat protein nuc-2.
    
 0.592
BK809_0006427
Putative Rho-type GTPase-activating protein 4.
    
 0.591
BK809_0006449
PH domain-containing protein.
   
 0.584
BK809_0006485
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase cnrN.
   
 0.570
BK809_0002437
Putative nedd8-like protein.
    
  0.564
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.