STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0007318Cutinase transcription factor 1 alpha. (879 aa)    
Predicted Functional Partners:
BK809_0006485
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase cnrN.
    
 0.672
BK809_0004646
GRIP domain-containing protein.
    
 0.669
BK809_0002129
Putative an1-type zinc finger protein.
    
 0.652
BK809_0006529
Ubiquitin-60S ribosomal protein L40.
    
 0.652
BK809_0002069
Ubiquitin-60S ribosomal protein L40.
    
 0.652
BK809_0002555
Putative ubiquitin-40s ribosomal protein s31 fusion protein.
    
  0.647
BK809_0002836
Putative basic-leucine zipper transcription factor.
    
  0.647
BK809_0003125
CIA30 domain-containing protein.
    
  0.647
BK809_0000554
E3 ubiquitin-protein ligase HERC2.
   
 0.626
BK809_0001091
Anaphase-promoting complex subunit 10.
   
  0.619
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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