STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0007295MYND-type domain-containing protein. (417 aa)    
Predicted Functional Partners:
BK809_0006610
Putative methyltransferase.
    
 0.799
BK809_0002849
Uncharacterized protein.
   
 0.777
BK809_0001924
Uncharacterized protein.
    
 0.717
BK809_0002009
Calmodulin; Belongs to the calmodulin family.
    
 0.717
BK809_0005557
Myosin regulatory light chain cdc4.
    
 0.717
BK809_0006725
WD repeat-containing protein slp1.
    
  0.609
BK809_0001017
Polyadenylation factor subunit 2.
    
  0.609
BK809_0001311
Uncharacterized protein.
    
  0.609
BK809_0001794
Putative WD repeat-containing protein.
    
  0.609
BK809_0002096
Transcription initiation factor TFIID subunit 5.
    
  0.609
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.