STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0007194Uncharacterized protein. (632 aa)    
Predicted Functional Partners:
BK809_0004920
SH3 domain-containing protein.
   
 0.850
BK809_0007193
Serine/threonine-protein kinase PSK2.
 
  
  0.734
BK809_0000554
E3 ubiquitin-protein ligase HERC2.
   
  0.605
BK809_0002538
Xylosyltransferase oxt.
    
  0.504
BK809_0003455
26S proteasome regulatory subunit rpn11.
    
  0.498
BK809_0002197
Transcription factor tau subunit sfc4.
    
  0.495
BK809_0004269
Putative rna polymerase iii transcription factor.
    
  0.493
BK809_0007012
Urea amidolyase.
    
 0.489
BK809_0003427
Uncharacterized protein.
  
 
  0.470
BK809_0000848
Uncharacterized protein.
  
 
  0.459
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.