STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0007731Putative ubiquitin-conjugating enzyme E2 W; Belongs to the ubiquitin-conjugating enzyme family. (141 aa)    
Predicted Functional Partners:
BK809_0003742
Putative ubiquitin fusion degradation protein C12B10.01c.
    
 0.954
BK809_0002959
Putative ubiquitin-conjugating enzyme.
   
 0.901
BK809_0007451
Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family.
 
  
   0.889
BK809_0002046
Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family.
   
 0.857
BK809_0002058
Ubiquitin-like protein SMT3.
   
 0.823
BK809_0005336
Ubiquitin-conjugating enzyme E2 8; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.821
BK809_0005726
STIP1 homology and U box-containing protein 1.
    
 0.820
BK809_0006239
Putative ubiquitin-conjugating enzyme.
    
 0.815
BK809_0007606
Peroxisomal coenzyme A diphosphatase 1, peroxisomal.
 
   
  0.790
BK809_0008059
Ubiquitin-conjugating enzyme E2 J1.
     
 0.783
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.