STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0007859Uncharacterized protein. (110 aa)    
Predicted Functional Partners:
BK809_0001639
RAD50-interacting protein 1.
    
 0.975
BK809_0002369
Centromere/kinetochore protein zw10-like protein.
    
 0.972
BK809_0005225
Protein transport protein sec22; Belongs to the synaptobrevin family.
    
 0.970
BK809_0004044
Putative vesicular-fusion protein sec17-like protein.
    
 0.892
BK809_0000644
Protein sly1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.879
BK809_0006995
Synaptobrevin-like protein; Belongs to the synaptobrevin family.
    
 
 0.869
BK809_0006513
Protein transport protein bos1.
    
 0.848
BK809_0005435
Putative er-golgi snare complex subunit.
    
 
 0.840
BK809_0004010
Protein transport protein BET1.
   
 0.797
BK809_0002919
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 
 0.751
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.