STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0008032MFAP1 domain-containing protein. (437 aa)    
Predicted Functional Partners:
BK809_0005522
U4/U6.U5 small nuclear ribonucleoprotein component snu23.
   
 0.996
BK809_0004925
Pre-mRNA-splicing factor 38A.
   
 0.995
BK809_0005331
DNA replication protein 4.
   
 0.992
BK809_0004068
U4/U6.U5 tri-snRNP-associated protein 1.
   
 0.991
BK809_0002620
Putative pre-mrna splicing factor prp1.
   
 0.990
BK809_0003236
U4/U6 small nuclear ribonucleoprotein Prp31.
   
 0.985
BK809_0007753
Putative WD repeat-containing protein.
 
 
  0.980
BK809_0003643
Pre-mRNA-processing-splicing factor 8.
   
 
 0.979
BK809_0007548
U2 snRNP component prp10.
   
 
 0.978
BK809_0005368
Putative pre-mrna splicing factor.
   
 
 0.977
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.