STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0003066Protein sym1; Belongs to the peroxisomal membrane protein PXMP2/4 family. (235 aa)    
Predicted Functional Partners:
BK809_0003065
Uncharacterized protein.
 
      0.757
BK809_0005048
Peroxisomal biogenesis factor 19.
    
 0.734
BK809_0002941
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
      0.734
BK809_0005311
Putative peroxisomal biogenesis factor.
   
 
 0.674
BK809_0005899
Peroxisomal biogenesis factor 3.
   
 
 0.661
BK809_0001803
Peroxisomal membrane protein PEX16.
     
 0.643
BK809_0003968
Peroxisomal membrane protein PMP47A; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.636
BK809_0007730
Peroxisomal membrane protein PAS20.
   
 
 0.627
BK809_0006224
Peroxisomal membrane protein PER10.
   
 
  0.618
BK809_0007285
Protein MSP1; Belongs to the AAA ATPase family.
   
 
 0.618
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.