STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0003202N amino acid transport system protein. (521 aa)    
Predicted Functional Partners:
BK809_0000730
Uncharacterized protein.
     
 0.840
BK809_0001637
Glutamate decarboxylase 1.
   
 
 0.807
BK809_0004989
Uncharacterized protein.
 
      0.727
BK809_0001721
Synaptobrevin-like protein.
     
 0.724
BK809_0007430
Protein transport protein sec9.
   
 
 0.709
BK809_0004365
Ras-related GTP-binding protein A.
   
 0.687
BK809_0006896
Putative MFS-type transporter.
     
 0.659
BK809_0000434
Putative MFS-type transporter.
     
 0.659
BK809_0005793
Putative MFS-type transporter.
     
 0.659
BK809_0002021
Protein transport protein sec1; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.630
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.